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🧬 Codon Bias Evolution

Synonymous codons aren't equivalent: some translate faster/more accurately. Selection-mutation-drift balance determines codon usage. High expression genes show stronger bias toward optimal codons.

Probability of mutating to non-optimal
Generation: 0
Optimal Codon Freq: 0.50
Mean Fitness: 1.00
CAI (Codon Adaptation): 0.50
Effective Ne×s: 0.50
Selection-Mutation-Drift: When Ne×s >> 1, selection dominates and optimal codons fix. When Ne×s << 1, drift dominates and mutation bias determines frequency. E. coli shows strong bias; humans show weak bias.